Bioinformatics

SERVICES

1. High-Throughput RNA-seq Analysis (Bulk & Program-Scale)

End-to-end processing of RNA-seq datasets, including quality control, alignment, quantification, normalization, differential expression, and structured reporting. Designed for programs handling dozens to thousands of samples across treatments, environments, or timepoints.

2. microRNA & Regulatory RNA Analysis

Specialized analysis of miRNA, small RNA, and regulatory RNA datasets, including:

• miRNA expression profiling

• Target prediction and validation workflows

• Integrated miRNA–mRNA expression analysis

• Regulatory network inference

This service is particularly suited for programs studying gene regulation, stress responses, trait expression, and RNA-mediated control mechanisms.

3. Host–Pathogen Interaction & Dual RNA Analysis

Integrated RNA-based analysis of host–pathogen systems, including:

• Dual RNA-seq analysis

• Pathogen-responsive host expression profiling

• Virulence- and defense-related pathway interrogation

• Comparative interaction analysis across conditions or genotypes

Optimized for agricultural, plant pathology, and microbial interaction programs.

4. dsRNA / RNAi-Oriented Data Analysis

Bioinformatics support for projects involving exogenous dsRNA, RNA interference (RNAi), and gene silencing strategies, including:

• Target gene expression assessment

• Off-target and specificity evaluation

• Host and pathogen response profiling

• Comparative analysis across delivery or treatment strategies

This service reflects direct alignment with Zynt Bio’s foundational research expertise.

5. Custom RNA Pipelines & Workflow Automation

Design and deployment of documented, reusable RNA analysis pipelines to ensure consistency across projects, years, and teams. Includes batch processing, automation, and standardized outputs.

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1. RNA-seq Analysis & Interpretation

Best for: Academic labs, biotech startups, CRO overflow work

Includes:

• Raw data QC and preprocessing

• Alignment and quantification

• Differential expression analysis

• Functional enrichment and pathway analysis

• Publication-ready figures and tables

• Methods text for manuscripts

Why Zynt Bio: Deep experience with RNA biology and expression dynamics ensures biologically sound interpretation—not just statistically significant results.

2. Small RNA / miRNA Analysis

Best for: Gene regulation studies, stress-response research, crop and microbial systems

Includes:

• Small RNA-seq processing

• miRNA identification and quantification

• Target prediction and integration with mRNA expression

• Comparative expression analysis

Why Zynt Bio: This builds directly on advanced training in miRNA expression analysis and regulatory networks.

3. Host–Pathogen & Stress-Response Transcriptomics

Best for: Plant pathology, microbial interaction studies, agricultural biotech

Includes:

• Dual RNA-seq or comparative transcriptomics

• Pathogen and host expression profiling

• Functional interpretation linked to phenotype or stress outcomes

Why Zynt Bio: Rare combination of pathogen biology, RNA-based mechanisms, and computational analysis.

4. Experimental Design & Bioinformatics Consulting

Best for: Labs planning RNA-seq or multi-omics studies

Includes:

• Study design review before sequencing

• Power and replication guidance

• Technology and pipeline recommendations

• Interpretation troubleshooting

Why Zynt Bio: Prevents costly mistakes and strengthens downstream analysis and publications.